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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs6710789 chr2:174081790 C/T PRHOXNB chr13:28552243-28562774:- 0.56 7.93 1.64E-10 Box Plot
ACC rs67167096 chr3:175540360 TGTAA/T PRHOXNB chr13:28552243-28562774:- 0.66 8.66 1.15E-11 Box Plot
ACC rs67320130 chr3:40330266 C/T PRHOXNB chr13:28552243-28562774:- 0.63 8.21 5.93E-11 Box Plot
ACC rs6733281 chr2:16873378 T/C TFDP3 chrX:132350697-132352376:- 1.08 8.53 1.87E-11 Box Plot
ACC rs6753829 chr2:88722291 C/T PRHOXNB chr13:28552243-28562774:- 0.6 8.1 8.85E-11 Box Plot
ACC rs67995234 chr17:66686728 G/T C2orf57 chr2:232457575-232458994:+ 0.75 7.56 6.38E-10 Box Plot
ACC rs6845870 chr4:17541898 A/C GC chr4:72607410-72669758:- 0.81 11.17 1.97E-15 Box Plot
ACC rs6898666 chr5:120317634 C/A GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs6915496 chr6:46709612 C/T PRHOXNB chr13:28552243-28562774:- 0.61 7.61 5.22E-10 Box Plot
ACC rs693252 chr8:9824419 T/C PRHOXNB chr13:28552243-28562774:- -0.61 -8.02 1.17E-10 Box Plot
ACC rs6963645 chr7:149659549 C/T OR5V1 chr6:29323007-29399744:- -0.64 -8.05 1.05E-10 Box Plot
ACC rs6981824 chr8:112742964 G/T KRT6C chr12:52862300-52867569:- 0.7 8.16 7.09E-11 Box Plot
ACC rs6982374 chr8:112750587 G/A KRT6C chr12:52862300-52867569:- 0.71 8.21 5.9E-11 Box Plot
ACC rs6986228 chr8:112809521 A/G KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs6986228 chr8:112809521 A/G KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot